To reinforce our team in Wädenswil, Switzerland, we are seeking a
Post diploma internship “Data analysis (genomics, proteomics) of plant growth stimulating bacteria”
Employer
Agroscope
Work Location
Zürich, Switzerland
Employment fraction
100%
Type of contract
temporary
Job description
Agroscope is the Swiss centre of excellence for research in agriculture, nutrition and the environment. We have an opening for a motivated Post diploma student to join AS SOON AS POSSIBLE.
Start date: July 1, 2026 (or upon agreement)
We are looking for a dedicated individual who enjoys analyzing and integrating functional genomics data (primarily genome sequence and proteomics data, and possibly RNA-seq and Tn-seq data) and who can help us understand the mechanisms that allow bacteria to both stimulate plant growth and, in addition, inhibit the growth of harmful plant pathogens. We offer a diverse and international environment, a strong team spirit, and practical, innovative research. For further information, please contact Dr. Christian Ahrens, Team Leader Microbial Genomics & Bioinformatics (Molecular Ecology Group, Agroscope) and Group Leader at the SIB Swiss Institute of Bioinformatics (https://www.sib.swiss /christian-ahrens-group/).
Tasks
- Analysing microbial proteomics data; integration with genome information
- Genome assembly of bacteria using NGS data (Illumina, PacBio, Oxford Nanopore Technologies) and genome annotation
- Help with the analysis of other OMICS data (RNA-Seq, Tn-Seq)
- Contribute to research projects (including publications) of the Microbial Genomics and Bioinformatics Team
- Maintenance & extension of data analysis pipelines (proteomics, genome assembly)
Profile requirements
- Recently (less than 10 months ago) finished Master degree (ETH or University, FH)
- Motivated scientist with a background/degree in Bioinformatics/Computational Biology
- Excellent programming skills (Python/R); experience in the analysis of functional genomics data is a plus
- Strong team player with good communication skills
- Knowledge of (ideally) two official Swiss languages and very good command of English
How to apply